Are you running WordPress 3.5? If not, you should try upgrading because the stability of the blog-switching functionality has been greatly improved in this version:
Multisite’s switch_to_blog() is now significantly faster and more reliable
Once you have done this, try using the trunk version of the Memcached Object Cache plugin which adds support for the new blog-switching performance enhancements in WordPress 3.5:
Add support for wp_cache_switch_to_blog().
We were experiencing similar problems with switch_to_blog()
and Memcached Object Cache in WordPress 3.4, and making the above changes resolved the problems in our case.
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