While you might not want / be able to use native query, it is still the easiest and most reliable way to generate SQL like that.
$wpdb->last_query
will remember last query performed and defining SAVEQUERIES
constants will make $wpdb->queries
contain all of the queries performed in current load (not advisable in production for performance).
So expressing desired query via API and looking at SQL that was generated for it is the best way to go about it.
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