It could be that the server uses a different working directory than the manage.py command. Since you provide a relative path to the sqlite database, it is created in the working directory. Try it with an absolute path, e.g.:
'NAME': '/tmp/mysite.sqlite3',
Remember that you have to either run ./manage.py syncdb again or copy your current database with the existing tables to /tmp.
If it resolves the error message, you can look for a better place than /tmp 🙂
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