I did more research and found a plugin that corrects the pagination issues with multiple categories. To summarize, I am using using a plugin called
WordPress Category Archive – www.wordpress.org/extend/plugins/wp-category-archive/
to display my category specific archive. There were some issues with pagination due to the year/month being included in the url.
The Solution: A plugin called
Category Pagination fix – http://wordpress.org/extend/plugins/category-pagination-fix/
Everything is working perfectly now! Hope this helps others. Thanks 🙂
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