I forgot to add !is_admin()
check to my pre_get_posts
function. Altered section of code below.
add_action( 'pre_get_posts', 'mpe_portfolio_sort_order');
function mpe_portfolio_sort_order($query){
if(is_archive() && ! is_admin() ):
$query->set( 'order', 'ASC' );
$query->set( 'orderby', 'menu_order' );
endif;
};
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