Just found the answer after exploring the MySQL database and finding the right field.
Here is an answer from Ryan Cowles at the Jetpack staff:
The HTML version of your post is stored in
post_content
and the Markdown version is stored inpost_content_filtered
. You can see how it’s stored here.Specifics aside, if you write a post with Markdown enabled and then disable the module (or Jetpack entirely) the post will still display properly.
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