WP 4.7 in_category change?

I’ve found the issue. I’ve been running a filter on list_terms_exclusions specifically to remove all children of “Uncategorized” from appearing on the public website.

add_filter('list_terms_exclusions', 'my_list_terms_exclusions',10,2);  

However, using in_category() still returned matches on those categories, which was exactly what I wanted. I needed to hide those categories from appearing in category listings, but I still needed to know when a specific post had one or more of those categories present. And so I was able to use in_category() for that purpose.

This technique has worked fine for as long as I remember until 4.7

However, as of 4.7 (and possibly before), the in_category() function gets filtered by list_terms_exclusions. So it no longer returns any of my categories under Uncategorized.