First of all i wouldn’t use phpmyadmin for a database that large. Use something like Sequel Pro its free and easy to use.
Second if you dont want the tables that WPML Created and you have removed the plugin from your site you can remove the tables that it creates.
Upload the sql to a new database on your local machine and remove all this tables for each site:
wp_icl_cms_nav_cache
wp_icl_content_status
wp_icl_core_status
wp_icl_flags
wp_icl_languages
wp_icl_languages_translations
wp_icl_locale_map
wp_icl_message_status
wp_icl_node
wp_icl_reminders
wp_icl_strings
wp_icl_string_positions
wp_icl_string_status
wp_icl_string_translations
wp_icl_translate
wp_icl_translate_job
wp_icl_translations
wp_icl_translation_status
I assuming your prefix is wp_(1,2,3) and so on.
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