For skipping the post just use offset parameter in wp_query.
To display latest three post :
<?php
$latestpost = new WP_Query('order=asc&orderby=meta_value&meta_key=date&posts_per_page=3');
//Here add loop to display posts like
while($latestpost->have_posts()) : $latestpost->the_post();
the_title();
the_content();
endwhile; wp_reset_query();
//After that skip three posts using offset
$latestpost = new WP_Query('order=asc&orderby=meta_value&meta_key=date&posts_per_page=6&offset=3&paged=' . $paged);
the_title();
the_content();
endwhile; wp_reset_query();
?>
That’s it